CDS

Accession Number TCMCG066C06416
gbkey CDS
Protein Id XP_034580358.1
Location join(24088028..24088144,24089484..24089613,24089958..24090046,24090512..24090580,24090960..24091017,24091175..24091274,24093118..24093204,24093843..24093921,24094006..24094138,24094377..24094414)
Gene LOC117843767
GeneID 117843767
Organism Setaria viridis

Protein

Length 299aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633601
db_source XM_034724467.1
Definition THO complex subunit 3 isoform X2 [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category S
Description Anaphase-promoting complex subunit 4 WD40 domain
KEGG_TC -
KEGG_Module M00406        [VIEW IN KEGG]
KEGG_Reaction R09009        [VIEW IN KEGG]
KEGG_rclass RC02396        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01003        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12880        [VIEW IN KEGG]
ko:K13379        [VIEW IN KEGG]
EC 5.4.99.30        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00520        [VIEW IN KEGG]
ko03013        [VIEW IN KEGG]
ko03040        [VIEW IN KEGG]
map00520        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0000151        [VIEW IN EMBL-EBI]
GO:0000346        [VIEW IN EMBL-EBI]
GO:0000347        [VIEW IN EMBL-EBI]
GO:0000445        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006403        [VIEW IN EMBL-EBI]
GO:0006405        [VIEW IN EMBL-EBI]
GO:0006406        [VIEW IN EMBL-EBI]
GO:0006611        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010267        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0014070        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0015931        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016246        [VIEW IN EMBL-EBI]
GO:0016441        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0030422        [VIEW IN EMBL-EBI]
GO:0031047        [VIEW IN EMBL-EBI]
GO:0031050        [VIEW IN EMBL-EBI]
GO:0031461        [VIEW IN EMBL-EBI]
GO:0031503        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035194        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043331        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044403        [VIEW IN EMBL-EBI]
GO:0044417        [VIEW IN EMBL-EBI]
GO:0044419        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044766        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046784        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0050657        [VIEW IN EMBL-EBI]
GO:0050658        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051028        [VIEW IN EMBL-EBI]
GO:0051168        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051236        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0051701        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0051836        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0070918        [VIEW IN EMBL-EBI]
GO:0071166        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071359        [VIEW IN EMBL-EBI]
GO:0071407        [VIEW IN EMBL-EBI]
GO:0071426        [VIEW IN EMBL-EBI]
GO:0071427        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0080008        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901698        [VIEW IN EMBL-EBI]
GO:1901699        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1902579        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGGGCAAAGAAGAGGAGCGGAAGGGCAGCGGTGGCGCCGCCGCCGGCGTCTCGACCCCCGGGGCGAACCTGAAGGACCTCGTTTCGAGGGAATACTACGGCCACAAGAAGAAGTCGAAGGTTAAAGATATTGAACTGAAAGGCCACACAGATAGTGTAGATCAGCTATGCTGGGATCCAAATCATCCTGATACAGTTGCTACTGCAGCTGCTGACAAGTCTATTCGTCTTTGGGATGCTCGAAGTGGAAAATGTCAAGTTATTGAACTGAGTGGAGAAAACATCAACATCACATATAAACATGATGGTACTCAGATAGCTGTTGGAAACAAGGAGGATGAACTGACGATTTTGGATGTTCGGTCATTAAAAGTTGTTAAAAAACACAAGGCTAATTACGAGGTGAATGAGATTGCATGGAATAAAGCTGGAGATCTATTCTTCATCACTACTGGGCTAGGACACATTGAGGTGGTTAAGGATCTTGAGTTTTTGAAGCCCTGCAAATTGAATGCTCATACAGCAGGGTGTTATTGCATTGCAATGGATCCCCTTGATAGGTACTTCGCTGTTGGAAGTGCAGATTCACTTGTCAGTCTTTGGAATGTCAAAGAGTTGCTATGCATTAGAACCTTCACAAAACTTGAGTGGCCAGTAAGAACAGTTAGCTTCAATCATACTGGAGAATTCATTGCATATGCCAGTGAAGATCCTTTCATTGATATTGCGAATGTTGAGACTGGACGATCTGTTCATCAGATTCCTTGCAAAGCAGCTATGAACAGTGTTGAATGGAATCCTAAGTACAACCTCCTGGCCTATGCAGGAGATGACAAAAACAAATACCAAGCTGATGAAGGTGTTTTCCGGATATTTGGCTTTGAAACACATAACTGA
Protein:  
MEGKEEERKGSGGAAAGVSTPGANLKDLVSREYYGHKKKSKVKDIELKGHTDSVDQLCWDPNHPDTVATAAADKSIRLWDARSGKCQVIELSGENINITYKHDGTQIAVGNKEDELTILDVRSLKVVKKHKANYEVNEIAWNKAGDLFFITTGLGHIEVVKDLEFLKPCKLNAHTAGCYCIAMDPLDRYFAVGSADSLVSLWNVKELLCIRTFTKLEWPVRTVSFNHTGEFIAYASEDPFIDIANVETGRSVHQIPCKAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIFGFETHN